Is a
Patent attributes
Patent Jurisdiction
Patent Number
Date of Patent
August 10, 2010
Patent Application Number
10940192
Date Filed
September 14, 2004
Patent Primary Examiner
Patent abstract
The detection of protein sequence alignments firstly generates protein blocks having n successive C-alpha atoms from two protein sequences. A matrix of the distance of protein atoms from said C-alpha atoms for each block is then determined. A difference matrix is determined from respective distance matrices representing the differences between the protein blocks of the two protein structures. A Cellular Automaton (CA) model is generated in an initial configuration based upon the difference matrix, and evolved through at least one generation using predetermined rules. The rules determine which CA cells remain live and which are set to be dead.
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