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US Patent 11788139 Optimal index sequences for multiplex massively parallel sequencing

Patent 11788139 was granted and assigned to Illumina on October, 2023 by the United States Patent and Trademark Office.

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Contents

Patent abstractTimelineTable: Further ResourcesReferences
Is a
Patent
Patent

Patent attributes

Patent Applicant
Illumina
Illumina
Current Assignee
Illumina
Illumina
Patent Jurisdiction
United States Patent and Trademark Office
United States Patent and Trademark Office
Patent Number
11788139
Patent Inventor Names
Ryan Kelley
Eric Vermaas
Gordon Bean
Date of Patent
October 17, 2023
Patent Application Number
17307959
Date Filed
May 4, 2021
Patent Citations
‌
US Patent 9752188 Methods of lowering the error rate of massively parallel DNA sequencing using duplex consensus sequencing
‌
US Patent 8728736 Methods and compositions for multiplex PCR
‌
US Patent 8822150 Methods for indexing samples and sequencing multiple polynucleotide templates
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US Patent 9040256 Transposon end compositions and methods for modifying nucleic acids
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US Patent 10760127 Methods of lowering the error rate of massively parallel DNA sequencing using duplex consensus sequencing
‌
US Patent 11028435 Optimal index sequences for multiplex massively parallel sequencing
‌
US Patent 11028436 Universal short adapters for indexing of polynucleotide samples
‌
US Patent 11047006 Methods of lowering the error rate of massively parallel DNA sequencing using duplex consensus sequencing
...
Patent Primary Examiner
‌
Kyoung Lee
CPC Code
‌
C40B 40/06
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C12Q 1/6811
‌
C12Q 1/6869
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C12N 15/1065
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G16B 30/00
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C12Q 1/6874
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G16B 30/10
Patent abstract

The disclosed embodiments concern index oligonucleotides configured to identify sources of samples of nucleic acids and methods, apparatus, systems and computer program products for identifying and making the index oligonucleotides. In some implementations, the index oligonucleotides include a set of index sequences, a Hamming distance between any two index sequences of the set of index sequences meeting one or more criteria. System, apparatus, and computer program products are also provided for determining a sequence of interest using the index oligonucleotides.

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